I finally got the images showing in the T3 template that I'm using but one problem is that if I upload a gallery via the Image Gallery tab in the editor, the popups only work if I have the Modalizer plugin enabled and then that causes conflicts with something that was using the Modalizer window.

It would be really useful to have the popups work for the auto gallery and not just those added using the plugin syntax in the article body but they just open in a new window as soon as I disable Modalizer.

Could you provide a link to your site?